The detailed information of tRNA gene sequence


Sequence ID>PL191000808
Genome IDCP030127
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesIndioceanicola profundi SCSIO 08040 plasmid:unnamed1 (CP030127)
Start position on genome 953722
End posion on genome 953646
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gacatgttgg
tRNA gene sequence 
CGCGGGATGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGCAGGTTCAAA
TCCTGCTCCCGCAACCA
Downstream region at tRNA end position 
accttgcctt
Secondary structure (Cloverleaf model)
>PL191000808	Met	CAT
                   g      ACCA accttgcctt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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