The detailed information of tRNA gene sequence


Sequence ID>PL191000832
Genome IDCP031100
Search identical group
Phylum/ClassFirmicutes
SpeciesClostridium botulinum CFSAN034202 plasmid:p1_CFSAN034202 (CP031100)
Start position on genome 22798
End posion on genome 22702
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcttttatat
tRNA gene sequence 
GGAAGGATAAACCTAATGGTAAGGTAGTAGTTTGCTAAACTATCAGTAATCAATATTTTA
TATTGGTGTGTGGGTTCAAGTCCCGCTCCTTCCGCCA
Downstream region at tRNA end position 
atggggatag
Secondary structure (Cloverleaf model)
>PL191000832	Ser	GCT
                   t      GCCA atggggatag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T G
                    T     C G C C C     A
      A A T        A      | + | | |     A
    T       C C A A       G T G G G     C
    G         |   |                 T T
    G       A G G T
      T A          A     CAGTAATCAATATTTTATATTGGTGT
                    G + T
                    T - A
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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