The detailed information of tRNA gene sequence


Sequence ID>PL191000837
Genome IDCP031152
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloplanus sp. CBA1113 plasmid:pCBA1113-02 (CP031152)
Start position on genome 8574
End posion on genome 8649
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ggggcgacaT
tRNA gene sequence 
GCCGACGTGGTGTAATCCGGCGAGCATACGGTCCTGTCACGGCCGTGATCCGGGTTCAAA
TCCCGGCGTCGGCGTac
Downstream region at tRNA end position 
ccgggaggcg
Secondary structure (Cloverleaf model)
>PL191000837	Asp	GTC
                   T      GTac ccgggaggcg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C T A A        G      | | | | |     A
  C         T G T G       C C G G G     C
  G         + | | +                 T T
  G         G C A T
    C G A          A     TGAT
                    C - G
                    G - C
                    G - C
                    T + G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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