The detailed information of tRNA gene sequence


Sequence ID>PL191000840
Genome IDCP031152
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloplanus sp. CBA1113 plasmid:pCBA1113-02 (CP031152)
Start position on genome 9306
End posion on genome 9378
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aggccaaccc
tRNA gene sequence 
GCTCCAGTGGAGTAGCGGCCAAACTCACGGCCCTCTCACGGCCGAGCCCCCGGTTCGAAT
CCGGGCTGGAGCAttc
Downstream region at tRNA end position 
tccaacagtc
Secondary structure (Cloverleaf model)
>PL191000840	Glu	CTC
                   c      Attc tccaacagtc
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     G G G C C     A
      C G A        G      | | | | |     G
    G       T G A G       C C C G G     C
    G       | | | |                 T T
    C       A C T C
      C A A        A     AGCC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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