The detailed information of tRNA gene sequence


Sequence ID>PL191000910
Genome IDCP031730
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesStenotrophomonas rhizophila GA1 plasmid:unnamed1 (CP031730)
Start position on genome 5783
End posion on genome 5708
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taataatatt
tRNA gene sequence 
GGTCCCGTGGTGTAGCGGTTAACATGCCTGCCTGTCACGCAGGAGATCGCCGGTTCGATC
CCGGTCGGGACCGCCA
Downstream region at tRNA end position 
cttattgggg
Secondary structure (Cloverleaf model)
>PL191000910	Asp	GTC
                   t      GCCA cttattgggg
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          C T
                    T     T G G C C     A
      C G A        G      + | | | |     G
    G       T G T G       G C C G G     C
    G       | | | +                 T T
    T       A C A T
      T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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