The detailed information of tRNA gene sequence


Sequence ID>PL191001172
Genome IDCP033217
Search identical group
Phylum/ClassFirmicutes
SpeciesClostridioides difficile CD21062 plasmid:unnamed1 (CP033217)
Start position on genome 108915
End posion on genome 108840
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaacaatat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCGAGT
CCTGCCTCCGCAACCA
Downstream region at tRNA end position 
ttaaaatggc
Secondary structure (Cloverleaf model)
>PL191001172	Met	CAT
                   t      ACCA ttaaaatggc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G T C C     A
      T G A        G      | + | | |     G
    T       C G A G       G T A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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