The detailed information of tRNA gene sequence


Sequence ID>PL191001185
Genome IDCP033217
Search identical group
Phylum/ClassFirmicutes
SpeciesClostridioides difficile CD21062 plasmid:unnamed1 (CP033217)
Start position on genome 107698
End posion on genome 107622
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatttaatgt
tRNA gene sequence 
GGGCCATTAGCTCAGTTGGTTAGAGCGCCCGGCTCATAACCGGTAGGTCTGGGGTTCGAG
TCCCTGATGGCCCACCA
Downstream region at tRNA end position 
cattaaatta
Secondary structure (Cloverleaf model)
>PL191001185	Met	CAT
                   t      ACCA cattaaatta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G T C C C     A
      T G A        A      + + | | |     G
    T       C T C G       T G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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