The detailed information of tRNA gene sequence


Sequence ID>PL191001212
Genome IDCP033217
Search identical group
Phylum/ClassFirmicutes
SpeciesClostridioides difficile CD21062 plasmid:unnamed1 (CP033217)
Start position on genome 5080
End posion on genome 5004
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccagaaatac
tRNA gene sequence 
GGCGGTATAGCTTAGTTGGCTAGAGCGTTCGGTTCATACCCGAAAGGTCATAGGTTCGAC
TCCTATTACCGCTACCA
Downstream region at tRNA end position 
tctaactata
Secondary structure (Cloverleaf model)
>PL191001212	Met	CAT
                   c      ACCA tctaactata
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     A - T          T C
                    T     T A T C C     A
      T G A        A      | | | | |     G
    T       T T C G       A T A G G     C
    G       + | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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