The detailed information of tRNA gene sequence


Sequence ID>PL191001305
Genome IDCP035512
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHaematobacter massiliensis OT1 plasmid:pOT1-2 (CP035512)
Start position on genome 98863
End posion on genome 98774
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accggccagc
tRNA gene sequence 
GGAGTGGTGGCCGAGTGGTCGAAGGCACACCCCTGCTAAGGGTGCAGGCGGGAAACCGTC
TCGAGGGTTCGAATCCCTTCCACTCCGCCA
Downstream region at tRNA end position 
cttcggtata
Secondary structure (Cloverleaf model)
>PL191001305	Ser	GCT
                   c      GCCA cttcggtata
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CAGGCGGGAAACCGTCTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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