The detailed information of tRNA gene sequence


Sequence ID>PL191001475
Genome IDCP040764
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesParacoccus sp. 2251 plasmid:unnamed3 (CP040764)
Start position on genome 47940
End posion on genome 48036
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
cgttcttggt
tRNA gene sequence 
gCGGAAGGGATTCGTCCCCGGTGGGGCGGCCGGACTTCAACTCCGGTTGGGGCAGCGAGC
CTGTCCCGGGTGGGTTCGACTCCCATTCCCTTCCGCCAgt
Downstream region at tRNA end position 
cttccgaccg
Secondary structure (Cloverleaf model)
>PL191001475	Sec	TCA
                   t      CAgt cttccgaccg
                     g - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C          C C
                    G     C T T A C     T
    C C C T        A      | + + |       C
  C         G C T T       G G G T T     A
  G           |   +                 C G
  G         G G C G
    T G G          G     TTGGGGCAGCGAGCCTGTCCCGGGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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