The detailed information of tRNA gene sequence


Sequence ID>PL191001865
Genome IDLT906557
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesEscherichia coli plasmid:II (LT906557)
Start position on genome 80872
End posion on genome 80786
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cacaacggcc
tRNA gene sequence 
GGAGAGTAGGGAGCATGGTGCTCAAGCGGTCTTGAAAACCGTCCCATTGCGCAAGCGATG
ATGGTTCGATTCCATTACTCTCCGCCA
Downstream region at tRNA end position 
gcgcaacgtt
Secondary structure (Cloverleaf model)
>PL191001865	Ser	TGA
                   c      GCCA gcgcaacgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T T
                    A     T T A C C     A
        A C        G      + | | | |     G
      T     G A G G       G A T G G     C
      G     | | |                   T T
      G     C T C A
        T G        A     CCCATTGCGCAAGCGAT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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