The detailed information of tRNA gene sequence


Sequence ID>PHG181003289
Genome IDKX397371
Search identical group
Phylum/ClassMyoviridae
SpeciesErwinia phage vB_EamM_Parshik (KX397371)
Start position on genome 5033
End posion on genome 5123
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taccatttgt
tRNA gene sequence 
AGAGAATTGACTGAGTTGGTTTAAGGTGCTCCCCTGCTAAGGGAGTGTATGCGAAAGTGT
ACCATTGGTTCGAATCCAATATTCTCTGCCA
Downstream region at tRNA end position 
tgttctcttg
Secondary structure (Cloverleaf model)
>PHG181003289	Ser	GCT
                   t      GCCA tgttctcttg
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     T A A C C     A
    T T G A        G      | | | | |     G
  G         G T C A       A T T G G     C
  G           + | |                 T T
  T         A G G T
    T T A          G     TGTATGCGAAAGTGTACC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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