The detailed information of tRNA gene sequence


Sequence ID>PHG181004837
Genome IDMF001361
Search identical group
Phylum/ClassSiphoviridae
SpeciesEnterococcus phage EF5 (MF001361)
Start position on genome 65946
End posion on genome 65857
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcccttttac
tRNA gene sequence 
GGAGCTATGACTGAGAGGCTGAAGGTGACGCACTGCTAATGCGTTAGTCGACATAAAGTT
GGCTCATGGGTTCGAATCCCATTAGCTCCTttt
Downstream region at tRNA end position 
attaaaaata
Secondary structure (Cloverleaf model)
>PHG181004837	Ser	GCT
                   c      Tttt attaaaaata
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     T A C C C     A
      A G A        G      | | | | |     G
    G       G T C A       A T G G G     C
    G         + | |                 T T
    C       A G G T
      T G A        G     TAGTCGACATAAAGTTGGCTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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