The detailed information of tRNA gene sequence


Sequence ID>PHG181005003
Genome IDMF158038
Search identical group
Phylum/ClassSiphoviridae
SpeciesShigella phage Sf11 SMD-2017 (MF158038)
Start position on genome 20558
End posion on genome 20645
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctaaataaac
tRNA gene sequence 
GGATAGTTGGCTGAGAGGCCGAAAGCGGTCGGTTGCTAACCGATAAACCGGAAACGGTTC
ACAGGTTCGAATCCTGTACTATCCGCCA
Downstream region at tRNA end position 
tattaaacac
Secondary structure (Cloverleaf model)
>PHG181005003	Ser	GCT
                   c      GCCA tattaaacac
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C
                     T - A          T A
                    T     T G T C C     A
      A G A        G      | | | | |     G
    G       G T C G       A C A G G     C
    G         | | |                 T T
    C       A A G C
      C G A        G     AAACCGGAAACGGTTC
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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