The detailed information of tRNA gene sequence


Sequence ID>PHG181006127
Genome IDMF787246
Search identical group
Phylum/Classunclassified Herelleviridae
SpeciesLactobacillus phage LpeD (MF787246)
Start position on genome 138763
End posion on genome 138674
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attatagtaT
tRNA gene sequence 
GGAAAGTTGACAGAGTGGTTGATTGTGGCTCCCTGCTAAGGAGTTAATCGTGTTAAGCGG
TTCGGGGGTTCAAATCCCTCACTTTCCATtt
Downstream region at tRNA end position 
caatactcat
Secondary structure (Cloverleaf model)
>PHG181006127	Ser	GCT
                   T      ATtt caatactcat
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | + | | |     A
    G       G A C A       G G G G G     C
    G       + | | |                 T T
    T       T T G T
      T G A        G     TAATCGTGTTAAGCGGTTC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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