The detailed information of tRNA gene sequence


Sequence ID>PHG181006356
Genome IDMF979564
Search identical group
Phylum/ClassSiphoviridae
SpeciesPectobacterium phage DU_PP_V (MF979564)
Start position on genome 39773
End posion on genome 39684
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttataaattt
tRNA gene sequence 
GGAAGGATACACTAATTTGGTAAGTGAGCTGACTGCTAATCAGTGGGTTGCAAAACAGCC
TTGTGGGTTCAAGTCCCTCTCCTTCCGCCA
Downstream region at tRNA end position 
aattaaatta
Secondary structure (Cloverleaf model)
>PHG181006356	Ser	GCT
                   t      GCCA aattaaatta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T G
                    T     C T C C C     A
      T A A        A      |   | | |     A
    T       T C A C       G T G G G     C
    T       | | | |                 T T
    G       A G T G
      G T A        A     GGGTTGCAAAACAGCCTT
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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