The detailed information of tRNA gene sequence


Sequence ID>PHG181006660
Genome IDMG189906
Search identical group
Phylum/ClassSiphoviridae
SpeciesStenotrophomonas phage vB_SmaS_DLP_5 (MG189906)
Start position on genome 50777
End posion on genome 50864
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atgttgcctc
tRNA gene sequence 
GGATAGATGGGTGAGTGGCTTAAACCGGCGACCTGCTACGTCGCTTCCTCGAAAGGGGAC
GAAGGTTCGAATCCTTCTCTATCCGCCA
Downstream region at tRNA end position 
gcatcgtcta
Secondary structure (Cloverleaf model)
>PHG181006660	Ser	GCT
                   c      GCCA gcatcgtcta
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C
                     A - T          T A
                    T     C T T C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A A G G     C
    G         | | |                 T T
    C       A A C C
      T T A        G     TTCCTCGAAAGGGGAC
                    G - C
                    C - G
                    G - C
                    A - T
                    C - G
                  C       C
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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