The detailed information of tRNA gene sequence


Sequence ID>PHG181007410
Genome IDMG948468
Search identical group
Phylum/ClassSiphoviridae
SpeciesPantoea phage vB_PagS_Vid5 (MG948468)
Start position on genome 44419
End posion on genome 44332
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aatcaatttt
tRNA gene sequence 
GGATAGTTGGTCGAGAGGTTTAAGGCGCCTGCTTGCTAAGCAGGAGAGTGGAAACGCTCC
ACAGGTTCGAATCCTGTACTATCCGCCA
Downstream region at tRNA end position 
tattggtcta
Secondary structure (Cloverleaf model)
>PHG181007410	Ser	GCT
                   t      GCCA tattggtcta
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T
                     G - C
                     T - A          T A
                    T     T G T C C     A
      A G A        G      | | | | |     G
    G       G C T G       A C A G G     C
    G         | + |                 T T
    T       A G G C
      T T A        G     AGAGTGGAAACGCTCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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