The detailed information of tRNA gene sequence


Sequence ID>CHL1810000383
Genome IDAP011960
Search identical group
Phylum/ClassStramenopiles
SpeciesFistulifera solaris JPCC DA0580 (AP011960)
Start position on genome 14444
End posion on genome 14518
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttaatggtgC
tRNA gene sequence 
GCGCTCTTAGTTCAGTTGGTAGAACGCTAGTCTCCAAAATTAGATGTCGAGGGTTCAAGT
CCTTCAGGGCGCGTtt
Downstream region at tRNA end position 
ctctttttaa
Secondary structure (Cloverleaf model)
>CHL1810000383	Trp	CCA
                   C      GTtt ctctttttaa
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T G
                    T     C T T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    C - G
                    T - A
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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