The detailed information of tRNA gene sequence


Sequence ID>CHL1810000396
Genome IDAP011960
Search identical group
Phylum/ClassStramenopiles
SpeciesFistulifera solaris JPCC DA0580 (AP011960)
Start position on genome 114193
End posion on genome 114264
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gtgtgtcatt
tRNA gene sequence 
GCTGGTGTAGCTCAATGGTAGAGCAACGGATTTGTAATCCGTAGGTTGGGGGTTCAAGTC
CCTTCACCAGCTtag
Downstream region at tRNA end position 
ataaacttga
Secondary structure (Cloverleaf model)
>CHL1810000396	Thr	TGT
                   t      Ttag ataaacttga
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
        A A        A      + + | | |     A
      T     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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