The detailed information of tRNA gene sequence


Sequence ID>CHL1810000398
Genome IDAP011960
Search identical group
Phylum/ClassStramenopiles
SpeciesFistulifera solaris JPCC DA0580 (AP011960)
Start position on genome 115212
End posion on genome 115300
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tatcaatttA
tRNA gene sequence 
GGAGAAATGGCTGAGTGGTCGAAAGCAATAGATTGCTAATCTATCGTACAATTTTCTGTA
CCCAGGGTTCGAATCCCTGTTTCTCCTAtg
Downstream region at tRNA end position 
ctaaaaaact
Secondary structure (Cloverleaf model)
>CHL1810000398	Ser	GCT
                   A      TAtg ctaaaaaact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CGTACAATTTTCTGTACC
                    A - T
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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