The detailed information of tRNA gene sequence


Sequence ID>CHL1810000404
Genome IDAP011960
Search identical group
Phylum/ClassStramenopiles
SpeciesFistulifera solaris JPCC DA0580 (AP011960)
Start position on genome 87871
End posion on genome 87798
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
attaaaaaac
tRNA gene sequence 
GGGCTATTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCTCTGGTTCAAA
TCCAGAATGGCCCAgcg
Downstream region at tRNA end position 
ggggtatagc
Secondary structure (Cloverleaf model)
>CHL1810000404	Ile	GAT
                   c      Agcg ggggtatagc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     T - A          T A
                    T     A G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       T C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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