The detailed information of tRNA gene sequence


Sequence ID>CHL1810000405
Genome IDAP011960
Search identical group
Phylum/ClassStramenopiles
SpeciesFistulifera solaris JPCC DA0580 (AP011960)
Start position on genome 87795
End posion on genome 87723
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
atggcccagc
tRNA gene sequence 
GGGGGTATAGCTCAGTTGGTAGAGCACCGTCTTTGCACGGCGGCTGTCAGCGGTTCGAAT
CCGCTTACCTCCAaat
Downstream region at tRNA end position 
gaaaacaaaa
Secondary structure (Cloverleaf model)
>CHL1810000405	Ala	TGC
                   c      Aaat gaaaacaaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CTGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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