The detailed information of tRNA gene sequence


Sequence ID>CHL1810000408
Genome IDAP011960
Search identical group
Phylum/ClassStramenopiles
SpeciesFistulifera solaris JPCC DA0580 (AP011960)
Start position on genome 11353
End posion on genome 11281
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
attttacaaa
tRNA gene sequence 
AAGCATGTAGCTCAGTGGATAGAGCATCAGATTCCGATTCTGAAAGCCAAGGGTTCGATT
CCCTTCATGCTTAtag
Downstream region at tRNA end position 
aagtgagaag
Secondary structure (Cloverleaf model)
>CHL1810000408	Arg	CCG
                   a      Atag aagtgagaag
                     A - T
                     A - T
                     G - C
                     C - G
                     A - T
                     T - A
                     G - C          T T
                    T     T T C C C     A
      T G A        A      | | | | |     G
    G       C T C G       A A G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     AAGCC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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