The detailed information of tRNA gene sequence


Sequence ID>CHL1810000549
Genome IDAP012987
Search identical group
Phylum/ClassRhodophyta
SpeciesPorphyridium purpureum (AP012987)
Start position on genome 76835
End posion on genome 76922
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaaacttcaT
tRNA gene sequence 
GGAGAAGTGGCAGAGTTGGTCGATTGCGTCTGATTTGAAATCAGAAGAGCCGCAAGGTTC
CGTGGGTTCGAATCCTACCTTCTCCGTta
Downstream region at tRNA end position 
gcgcttatga
Secondary structure (Cloverleaf model)
>CHL1810000549	Ser	TGA
                   T      GTta gcgcttatga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C A T C C     A
    T T G A        G      | | + | |     G
  G         G A C G       G T G G G     C
  G         + | | |                 T T
  T         T T G C
    C G A          G     AGAGCCGCAAGGTTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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