The detailed information of tRNA gene sequence


Sequence ID>CHL1810000600
Genome IDAP014625
Search identical group
Phylum/ClassStramenopiles
SpeciesTriparma laevis (AP014625)
Start position on genome 41190
End posion on genome 41276
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcataatttt
tRNA gene sequence 
GGAGAAATGGCTGAGTGGTCGAAAGCAATAGATTGCTAATCTATCGTACAGTTTACTGTA
CCCAGGGTTCGAATCCCTGTTTCTCCTtaa
Downstream region at tRNA end position 
tttaaaacat
Secondary structure (Cloverleaf model)
>CHL1810000600	Ser	GCT
                   t      Ttaa tttaaaacat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CGTACAGTTTACTGTACC
                    A - T
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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