The detailed information of tRNA gene sequence


Sequence ID>CHL1810000617
Genome IDAP014625
Search identical group
Phylum/ClassStramenopiles
SpeciesTriparma laevis (AP014625)
Start position on genome 17001
End posion on genome 16929
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atatattata
tRNA gene sequence 
GCGTCCTTAGTTCAGTTGGTAGAACGCTAGTCTCCAAAATTAGATGTCGAGGGTTCAAGT
CCTTCAGGGCGCGttt
Downstream region at tRNA end position 
ccctttttaa
Secondary structure (Cloverleaf model)
>CHL1810000617	Trp	CCA
                   a      Gttt ccctttttaa
                     G - C
                     C - G
                     G - C
                     T + G
                     C - G
                     C - G
                     T - A          T G
                    T     C T T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    C - G
                    T - A
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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