The detailed information of tRNA gene sequence


Sequence ID>CHL1810001023
Genome IDEU168190
Search identical group
Phylum/ClassStramenopiles
SpeciesHeterosigma akashiwo NIES 293 (EU168190)
Start position on genome 60275
End posion on genome 60200
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaaacttaaT
tRNA gene sequence 
CGGGATGTAGCGTAGTTTGGTAGCGTATCTGCTTTGGGAGCAGAGGGTCACAGGTTCAAA
TCCTGTCATCCCGATtt
Downstream region at tRNA end position 
aatttattac
Secondary structure (Cloverleaf model)
>CHL1810001023	Pro	TGG
                   T      ATtt aatttattac
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       T G C G       A C A G G     C
    T       + | | +                 T T
    G       G C G T
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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