The detailed information of tRNA gene sequence


Sequence ID>CHL1810001026
Genome IDEU168190
Search identical group
Phylum/ClassStramenopiles
SpeciesHeterosigma akashiwo NIES 293 (EU168190)
Start position on genome 42633
End posion on genome 42545
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggttaataaA
tRNA gene sequence 
GGAGAGATGGCAGAGTTGGTCGATTGTTTCTGATTTGAAATCAGATGAATTTCATAGATT
CCGTGGGTTCGAATCCCACTCTCTCTTTta
Downstream region at tRNA end position 
cttcaaatca
Secondary structure (Cloverleaf model)
>CHL1810001026	Ser	TGA
                   A      TTta cttcaaatca
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  G         + | | +                 T T
  T         T T G T
    C G A          T     TGAATTTCATAGATTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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