The detailed information of tRNA gene sequence


Sequence ID>CHL1810001028
Genome IDEU168190
Search identical group
Phylum/ClassStramenopiles
SpeciesHeterosigma akashiwo NIES 293 (EU168190)
Start position on genome 36794
End posion on genome 36722
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agtttaatta
tRNA gene sequence 
GCGTCCTTAGTTCAGTTGGTAGAACGTTGGTCTCCAAAACCAAATGTCGTGGGTTCAAGT
CCTACAGGACGTGttt
Downstream region at tRNA end position 
ttttataatc
Secondary structure (Cloverleaf model)
>CHL1810001028	Trp	CCA
                   a      Gttt ttttataatc
                     G + T
                     C - G
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A          T G
                    T     C A T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G T G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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