The detailed information of tRNA gene sequence


Sequence ID>CHL1810001029
Genome IDEU168190
Search identical group
Phylum/ClassStramenopiles
SpeciesHeterosigma akashiwo NIES 293 (EU168190)
Start position on genome 31022
End posion on genome 30948
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taaaaataaA
tRNA gene sequence 
GGCGGTATAGCCAAGTGGTAAGGCAGAAGATTGCAAATCTTTTATTCCCCAGTTCAAATC
TGGGTGCCGCCTACt
Downstream region at tRNA end position 
aataattttt
Secondary structure (Cloverleaf model)
>CHL1810001029	Cys	GCA
                   A      TACt aataattttt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     G G G T C     A
        G A        A      | | | | |     A
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATTC
                    G + T
                    A - T
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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