The detailed information of tRNA gene sequence


Sequence ID>CHL1810001463
Genome IDEU912438
Search identical group
Phylum/ClassStramenopiles
SpeciesVaucheria litorea (EU912438)
Start position on genome 82366
End posion on genome 82452
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaattcataT
tRNA gene sequence 
GCATCCGTGGCCGAGCGGTTGATGGCAACGGGCTCATAATCCGTTTTCCTTTGGAACACC
ACTGGTTCAAATCCAGTCGGATGCAAaa
Downstream region at tRNA end position 
tttcatttag
Secondary structure (Cloverleaf model)
>CHL1810001463	Met	CAT
                   T      AAaa tttcatttag
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     T G A C C     A
      C G A        G      | | | | |     A
    G       G C C G       A C T G G     C
    G       + | | |                 T T
    T       T G G C
      T G A        A     TTTCCTTTGGAACACC
                    A - T
                    C - G
                    G - C
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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