The detailed information of tRNA gene sequence


Sequence ID>CHL1810001469
Genome IDEU912438
Search identical group
Phylum/ClassStramenopiles
SpeciesVaucheria litorea (EU912438)
Start position on genome 103600
End posion on genome 103516
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
attataactT
tRNA gene sequence 
GCGGACCTGGCGGAATTGGCAGACGCGCTAGATTTAGGTTCTAGTGAGAATATCTTGTGA
GAGTTCAAGTCTCTCGGTCCGTATaa
Downstream region at tRNA end position 
aaaaagcaat
Secondary structure (Cloverleaf model)
>CHL1810001469	Leu	TAG
                   T      ATaa aaaaagcaat
                     G + T
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G          T G
                    T     C T C T C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGAGAATATCTTGT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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