The detailed information of tRNA gene sequence


Sequence ID>CHL1810001470
Genome IDEU912438
Search identical group
Phylum/ClassStramenopiles
SpeciesVaucheria litorea (EU912438)
Start position on genome 97568
End posion on genome 97495
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aataggtaga
tRNA gene sequence 
AGCGGAGTAGAGCAGCATGGTAGCTCGTTGGGCTCATAACCCGAAGGTCAGAGGTTCAAA
TCCACTCTCCGCTAtca
Downstream region at tRNA end position 
agccttagat
Secondary structure (Cloverleaf model)
>CHL1810001470	Met	CAT
                   a      Atca agccttagat
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C A C C     A
      C G A        A      | |   | |     A
    A       C G A G       A G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T + G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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