The detailed information of tRNA gene sequence


Sequence ID>CHL1810001472
Genome IDEU912438
Search identical group
Phylum/ClassStramenopiles
SpeciesVaucheria litorea (EU912438)
Start position on genome 73678
End posion on genome 73589
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaatagaatt
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCTAAAGCGATAGATTGCTAATCTATTGTACATAACATTGTG
TACCAAGGGTTCAAATCCCTTTCTCTCCTCta
Downstream region at tRNA end position 
attcataatt
Secondary structure (Cloverleaf model)
>CHL1810001472	Ser	GCT
                   t      TCta attcataatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     A
    G       G T C G       A A G G G     C
    G         | | |                 T T
    T       A A G C
      C T A        G     TGTACATAACATTGTGTACC
                    A - T
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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