The detailed information of tRNA gene sequence


Sequence ID>CHL1810001479
Genome IDEU912438
Search identical group
Phylum/ClassStramenopiles
SpeciesVaucheria litorea (EU912438)
Start position on genome 7372
End posion on genome 7291
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tatatttaaa
tRNA gene sequence 
GGGTCGATGCCTGAGTGGTTAAAAGGGACGGATTGTAAATCCGTTGGCAATGCCTACGTT
GGTTCAAATCTAACTCGGCCCAtaa
Downstream region at tRNA end position 
aaaataaaag
Secondary structure (Cloverleaf model)
>CHL1810001479	Tyr	GTA
                   a      Ataa aaaataaaag
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T          T A
                    T     C A A T C     A
      T G A        G      | | | + |     A
    G       G T C C       G T T G G     C
    G         | | |                 T T
    T       A A G G
      T A A        G     TGGCAATGCCTAC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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