The detailed information of tRNA gene sequence


Sequence ID>CHL1810001693
Genome IDFJ493497
Search identical group
Phylum/ClassViridiplantae
SpeciesMonomastix sp. OKE-1 (FJ493497)
Start position on genome 3199
End posion on genome 3289
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taaattataT
tRNA gene sequence 
GGAAGCGTGCCTGAGAGGCTTATAGGACAGAATTGCTAATTCTGCGAGTGTTTTAAAACG
CTCCGGGGGTTCGAATCCCCCCGCTTCCGAaa
Downstream region at tRNA end position 
ataacatata
Secondary structure (Cloverleaf model)
>CHL1810001693	Ser	GCT
                   T      GAaa ataacatata
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G T C C       G G G G G     C
    G       + | | |                 T T
    C       T A G G
      T T A        A     CGAGTGTTTTAAAACGCTCC
                    C - G
                    A - T
                    G - C
                    A - T
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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