The detailed information of tRNA gene sequence


Sequence ID>CHL1810001716
Genome IDFJ493498
Search identical group
Phylum/ClassViridiplantae
SpeciesPycnococcus provasolii CCMP 1203 (FJ493498)
Start position on genome 6180
End posion on genome 6266
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggcccaggaa
tRNA gene sequence 
GGAGAGGTGACCGAGTGGTTGAAGGTGCCAACCTGGAACGTTGGTTTAGTGGTGACGCTA
ACGAGGGTTCGAATCCCTCTCTCTCCGgtt
Downstream region at tRNA end position 
ccttatggta
Secondary structure (Cloverleaf model)
>CHL1810001716	Ser	GGA
                   a      Ggtt ccttatggta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    T       A G G T
      T G A        G     TTTAGTGGTGACGCTAAC
                    C - G
                    C - G
                    A - T
                    A - T
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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