The detailed information of tRNA gene sequence


Sequence ID>CHL1810001723
Genome IDFJ493498
Search identical group
Phylum/ClassViridiplantae
SpeciesPycnococcus provasolii CCMP 1203 (FJ493498)
Start position on genome 78897
End posion on genome 78970
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcatctgaaT
tRNA gene sequence 
GCCTGCTTAGCTCAGTGGTAGAGCGTCCGTCTCATACGCGGCTTGTCACTAGTTCGAATC
TAGTAGCAGGCAAat
Downstream region at tRNA end position 
ttcgaaaact
Secondary structure (Cloverleaf model)
>CHL1810001723	Met	CAT
                   T      AAat ttcgaaaact
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C
                     C - G
                     T - A          T A
                    T     T G A T C     A
        G A        A      | | | | |     G
      T     C T C G       A C T A G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     TTGTC
                    T   C
                    C - G
                    C - G
                    G - C
                    T + G
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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