The detailed information of tRNA gene sequence


Sequence ID>CHL1810001727
Genome IDFJ493498
Search identical group
Phylum/ClassViridiplantae
SpeciesPycnococcus provasolii CCMP 1203 (FJ493498)
Start position on genome 77496
End posion on genome 77423
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcaaaaaaac
tRNA gene sequence 
CGCGGAGTAGAGCAGCCTGGAAGCTCGCAAGGCTCATAACCTTGAGGTCGTGGGTTCAAA
TCCCACCTCCGCACtgt
Downstream region at tRNA end position 
ccaaggttat
Secondary structure (Cloverleaf model)
>CHL1810001727	Met	CAT
                   c      Ctgt ccaaggttat
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      C G A        A      | | | | |     A
    C       C G A G       G T G G G     C
    T       | | | |                 T T
    G       G C T C
      G A A        G     AGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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