The detailed information of tRNA gene sequence


Sequence ID>CHL1810002150
Genome IDFP102296
Search identical group
Phylum/ClassStramenopiles
SpeciesEctocarpus siliculosus (FP102296)
Start position on genome 28921
End posion on genome 28993
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtctcaaaga
tRNA gene sequence 
GCGTCCTTAGTTCAGTTGGTAGAACATAGGTCTCCAAAGCCTAGTGTCGAGGGTTCAATT
CCTTCAGGGCGTGtat
Downstream region at tRNA end position 
catcaaaaat
Secondary structure (Cloverleaf model)
>CHL1810002150	Trp	CCA
                   a      Gtat catcaaaaat
                     G + T
                     C - G
                     G - C
                     T + G
                     C - G
                     C - G
                     T - A          T T
                    T     C T T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          A     GTGTC
                    T - A
                    A - T
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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