The detailed information of tRNA gene sequence


Sequence ID>CHL1810002152
Genome IDFP102296
Search identical group
Phylum/ClassStramenopiles
SpeciesEctocarpus siliculosus (FP102296)
Start position on genome 72267
End posion on genome 72357
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttactccttt
tRNA gene sequence 
GGTGAGATGGCTGAGTGGCTTAAAGCGTTAGATTGCTAATCTATTGTACGAATAATCTTT
GTACCGAGGGTTCGAATCCCTCTCTTTCCTCtc
Downstream region at tRNA end position 
aaatacttta
Secondary structure (Cloverleaf model)
>CHL1810002152	Ser	GCT
                   t      TCtc aaatacttta
                     G - C
                     G - C
                     T   T
                     G + T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    C       A A G C
      T T A        G     TGTACGAATAATCTTTGTACC
                    T   T
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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