The detailed information of tRNA gene sequence


Sequence ID>CHL1810002172
Genome IDGQ231541
Search identical group
Phylum/ClassStramenopiles
SpeciesAureococcus anophagefferens CCMP 1984 (GQ231541)
Start position on genome 1513
End posion on genome 1588
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
attataaagT
tRNA gene sequence 
GGGCTATTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCCCTGGTTCAAA
TCCAGGATGGCCCATgg
Downstream region at tRNA end position 
ggatatagct
Secondary structure (Cloverleaf model)
>CHL1810002172	Ile	GAT
                   T      ATgg ggatatagct
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     T - A          T A
                    T     G G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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