The detailed information of tRNA gene sequence


Sequence ID>CHL1810002173
Genome IDGQ231541
Search identical group
Phylum/ClassStramenopiles
SpeciesAureococcus anophagefferens CCMP 1984 (GQ231541)
Start position on genome 1588
End posion on genome 1662
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gatggcccaT
tRNA gene sequence 
GGGGATATAGCTCAGTTGGTAGAGCGTTGCCTTTGCACGGCAAATGTCAGCGGTTCGAAT
CCGCTTATCTCCAAaa
Downstream region at tRNA end position 
aacaaaaatt
Secondary structure (Cloverleaf model)
>CHL1810002173	Ala	TGC
                   T      AAaa aacaaaaatt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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