The detailed information of tRNA gene sequence


Sequence ID>CHL1810002177
Genome IDGQ231541
Search identical group
Phylum/ClassStramenopiles
SpeciesAureococcus anophagefferens CCMP 1984 (GQ231541)
Start position on genome 64611
End posion on genome 64683
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tttaattttc
tRNA gene sequence 
GGGCTTATCGTCTAAGGGATCAGGACAGAAACCTTCTAAGTTTCTAATGTAGGTTCGAAT
CCTACTAAGCCCAatt
Downstream region at tRNA end position 
tttagatttc
Secondary structure (Cloverleaf model)
>CHL1810002177	Arg	TCT
                   c      Aatt tttagatttc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     A - T          T A
                    T     C A T C C     A
      G A A        C      | | | | |     G
    G       T C T G       G T A G G     C
    G       + | | |                 T T
    A       G G A C
      T C A        A     TAAT
                    G - C
                    A - T
                    A - T
                    A - T
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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