The detailed information of tRNA gene sequence


Sequence ID>CHL1810002181
Genome IDGQ231541
Search identical group
Phylum/ClassStramenopiles
SpeciesAureococcus anophagefferens CCMP 1984 (GQ231541)
Start position on genome 87678
End posion on genome 87593
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaactaatT
tRNA gene sequence 
GCATCTGTGGCCGAGTGGTCGAAGGCACCGGACTCATAATCCGTTTTCGTAAGAACGTCA
CTGGTTCAAACCCAGTCAGATGCAGaa
Downstream region at tRNA end position 
aaatttctct
Secondary structure (Cloverleaf model)
>CHL1810002181	Met	CAT
                   T      AGaa aaatttctct
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     T - A
                     G - C          C A
                    T     T G A C C     A
      T G A        G      | | | | |     A
    G       G C C G       A C T G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     TTTCGTAAGAACGTC
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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