The detailed information of tRNA gene sequence


Sequence ID>CHL1810002190
Genome IDGQ231541
Search identical group
Phylum/ClassStramenopiles
SpeciesAureococcus anophagefferens CCMP 1984 (GQ231541)
Start position on genome 29078
End posion on genome 29003
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ataattataT
tRNA gene sequence 
CGCGGAGTAGAGCAGTTTGGTAGCTCGTTGGGCTCATAACCCGAAGGCCAATGGTTCAAA
TCCATTCTCCGCTATta
Downstream region at tRNA end position 
gattgataaa
Secondary structure (Cloverleaf model)
>CHL1810002190	Met	CAT
                   T      ATta gattgataaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T T A C C     A
      T G A        A      | | | | |     A
    T       C G A G       A A T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T - A
                    T + G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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