The detailed information of tRNA gene sequence


Sequence ID>CHL1810002193
Genome IDGQ231541
Search identical group
Phylum/ClassStramenopiles
SpeciesAureococcus anophagefferens CCMP 1984 (GQ231541)
Start position on genome 9240
End posion on genome 9167
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atccaataaa
tRNA gene sequence 
CGGAATATAGCGCAGCTTGGTAGCGCGTCTGCTTTGGGAGCAGAATGTCGTAGGTTCAAA
TCCTACTATTCCGAatt
Downstream region at tRNA end position 
aattccgtat
Secondary structure (Cloverleaf model)
>CHL1810002193	Pro	TGG
                   a      Aatt aattccgtat
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     A - T          T A
                    T     C A T C C     A
      C G A        A      | | | | |     A
    T       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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