The detailed information of tRNA gene sequence


Sequence ID>CHL1810002197
Genome IDGQ231542
Search identical group
Phylum/ClassStramenopiles
SpeciesAureoumbra lagunensis CCMP 1507 (GQ231542)
Start position on genome 1513
End posion on genome 1588
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
attataatgT
tRNA gene sequence 
GGGCTATTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCCCTGGTTCAAA
TCCAGGATGGCCCATgg
Downstream region at tRNA end position 
gggtatagct
Secondary structure (Cloverleaf model)
>CHL1810002197	Ile	GAT
                   T      ATgg gggtatagct
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     T - A          T A
                    T     G G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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