The detailed information of tRNA gene sequence


Sequence ID>CHL1810002198
Genome IDGQ231542
Search identical group
Phylum/ClassStramenopiles
SpeciesAureoumbra lagunensis CCMP 1507 (GQ231542)
Start position on genome 1588
End posion on genome 1662
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gatggcccaT
tRNA gene sequence 
GGGGGTATAGCTCAGTTGGTAGAGCGCTGCCTTTGCAAGGCAGATGTCAGCGGTTCGAGT
CCGCTTATCTCCAAaa
Downstream region at tRNA end position 
atatttgtgt
Secondary structure (Cloverleaf model)
>CHL1810002198	Ala	TGC
                   T      AAaa atatttgtgt
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     A - T          T G
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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